PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013374
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 746aa    MW: 81781 Da    PI: 6.7448
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59543107PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS269.11.4e-823787073348
       GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102
                ++L++ Ae +++g+  laq +Larl+++ sp g+p+qR+a y++eAL+   ++   ++++  + s+ s    + ++ a+k fse+sP+l+f+++t Nqa+
  Ahy013374 378 DQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLPHS---NISNLTAFSPIS---FIFKVGAYKSFSEISPVLQFANFTSNQAL 471
                689********************************************998888...555544555555...99*************************** PP

       GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp.... 198
                 eave+ +r+HiiDfdi+ G+QW +++q+La R++++ sl++T+++sp++ ++ el+ t+e+L+++A+ ++++fe n+l   ++e+l+  ++ + +    
  Ahy013374 472 IEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSNASSLKVTAIVSPSNCDEVELNFTRENLSQYAKDINLSFELNIL---NIESLSSPSFPLASqffd 568
                ******************************************************************************9...555555555544433455 PP

       GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                 Ea+aVn+ l+ ++ +      +s  ++vL++vk+l+Pkvvv  ++++d+ + ++ +++++ l+yysal++sl+a    + +  +k+E+++++++i+nv+
  Ahy013374 569 SEAVAVNMPLSCFTHH------PSLVPSVLHFVKQLRPKVVVTLDRNCDRIDVPLPTKVVHVLQYYSALLESLDAV-NVNLDVLQKIEKHFIQPSIRNVI 661
                **********999987......344458*********************************************665.3466999**************** PP

       GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg 348
                +  +    + +e+l +Wr+ + ++GF++ ++s+++++qa +  + ++  g
  Ahy013374 662 TGHHHY--HSQEKLPHWRNLFVQSGFSSFTFSNFTEAQAXMSGAACA--G 707
                977776..899****************************99888777..4 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098540.332350715IPR005202Transcription factor GRAS
PfamPF035144.9E-80378707IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 746 aa     Download sequence    Send to blast
MPFPSEEFQG KGVLDFSSSY CSATDLFSLL QHQQQLVNNH SIHQPPPPLT RRKVEEKGRR  60
RRRRREENKG YVGCTEPTSV LDSRRSQSPP SSSCTMSSSL GSSNNSTSKG SAAGGGGGGC  120
SASAAALTSE NPLPPPPEGS MEKCGGTRMM DDWEGQDQSI LRLIMGDVED PSAGLTKLLQ  180
TGSHNVDFSS GGFGVVDQGG LIMDPSVPGN YPAFPFLGAE NTDGHIAKTG GVAEPMFSSG  240
NNPMLASTSP AAGVFGSQQP VFGIVDEKPQ VINPQFMMNH NQVQFSENPS FFVPLTYPQM  300
QEQHVVYSQQ PAKRPLSDAA VGHNYQVPRL PLLDSGQEQF ARRQQQAQLP LFPHHSQQQK  360
VSSAGDEASN QLQQAMFDQL YKTAELIEAG NPVLAQGILA RLNHQLSPIG KPFQRAALYM  420
KEALQLLPHS NISNLTAFSP ISFIFKVGAY KSFSEISPVL QFANFTSNQA LIEAVERFDR  480
IHIIDFDIGF GVQWSSFMQE LALRNSNASS LKVTAIVSPS NCDEVELNFT RENLSQYAKD  540
INLSFELNIL NIESLSSPSF PLASQFFDSE AVAVNMPLSC FTHHPSLVPS VLHFVKQLRP  600
KVVVTLDRNC DRIDVPLPTK VVHVLQYYSA LLESLDAVNV NLDVLQKIEK HFIQPSIRNV  660
ITGHHHYHSQ EKLPHWRNLF VQSGFSSFTF SNFTEAQAXM SGAACAGARV SGREKPFVSC  720
SMLAAKRPGL HFELEMLNHA TTKALT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A6e-2138970016338GRAS family transcription factor containing p
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15062RRKVEEKGRRRRR
25064RRKVEEKGRRRRRRR
35864RRRRRRR
45865RRRRRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015950601.10.0PREDICTED: scarecrow-like protein 27
TrEMBLI1J7R80.0I1J7R8_SOYBN; Uncharacterized protein
STRINGGLYMA01G33270.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.13e-79GRAS family protein